PDBe EMBL-EBI

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1. arpeggio arpeggio Public

   Calculation of interatomic interactions in molecular structures

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2. ccdutils ccdutils Public

   A set of python tools to deal with PDB chemical components definitions for small molecules, taken from the wwPDB Chemical Component Dictionary, uses RDKit

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3. pdbe-api-training pdbe-api-training Public

   Interactive Python notebooks for PDBe API training

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4. pdb-images pdb-images Public

   Generates images from mmCIF/BCIF files

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5. SIFTS SIFTS Public

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6. PDBe-MCP-Servers PDBe-MCP-Servers Public

   PDBe MCP Servers integrate Protein Data Bank Europe resources with LLMs via Model Context Protocol. Provides seamless access to protein structure data through API tools and graph database schema as…

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