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National Microbiome Data Collaborative

National Microbiome Data Collaborative

74 followers
https://microbiomedata.org/
support@microbiomedata.org

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nmdc-schema nmdc-schema Public

National Microbiome Data Collaborative (NMDC) unified data model

Python 51 14
docs docs Public

User-facing, web-based documentation about the NMDC

Dockerfile 3 5

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Showing 10 of 85 repositories

nmdc_automation Public
Prototype automation

microbiomedata/nmdc_automation's past year of commit activity

Python 2 4 55 3 Updated Sep 25, 2026
nmdc-lakehouse Public

microbiomedata/nmdc-lakehouse's past year of commit activity

Python 0 MIT 0 67 1 Updated Sep 25, 2026
nmdc-metadata-suggestor-ai-tool Public
A repository to that holds the code for the NMDC Submission portal metadata suggestor tool, powered by AI

microbiomedata/nmdc-metadata-suggestor-ai-tool's past year of commit activity

Python 2 2 31 7 Updated Sep 25, 2026
sheets_and_friends Public
Enhance a LinkML model with imported and optionally modified slots

microbiomedata/sheets_and_friends's past year of commit activity

Python 0 1 51 1 Updated Sep 25, 2026
nmdc-schema Public
National Microbiome Data Collaborative (NMDC) unified data model

microbiomedata/nmdc-schema's past year of commit activity

Python 51 CC0-1.0 14 450 (5 issues need help) 13 Updated Sep 25, 2026
nmdc-lakehouse-schema Public

microbiomedata/nmdc-lakehouse-schema's past year of commit activity

Python 0 Apache-2.0 0 5 0 Updated Sep 25, 2026
nmdc-server Public
Data portal client and server for NMDC.

microbiomedata/nmdc-server's past year of commit activity

Python 12 1 119 13 Updated Sep 25, 2026
metaPro Public
Workflow for meta-proteomics analysis

microbiomedata/metaPro's past year of commit activity

Python 7 BSD-2-Clause 3 8 0 Updated Sep 24, 2026
nmdc-mass-spec-automation Public
NMDC data processing system for metabolomics, lipidomics, and NOM data. Workflow and metadata manager.

microbiomedata/nmdc-mass-spec-automation's past year of commit activity

Python 1 1 3 3 Updated Sep 24, 2026
nmdc-client Public
A python client for interacting with the NMDC (National Microbiome Data Collaborative) runtime API.

microbiomedata/nmdc-client's past year of commit activity

Python 12 2 2 2 Updated Sep 23, 2026

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