combat-seq

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GenomeRx / RNA-Parallel

Parallel companions for five RNA-seq functions that are slow at cohort scale and have no worker argument: sva::ComBat_seq, edgeR::normLibSizes, limma::lmFit, limma::duplicateCorrelation and limma::removeBatchEffect. Each runs the original unmodified with its work split across workers and returns output identical() to the original's.

bioinformatics rna-seq r parallel-computing tcga bioconductor transcriptomics edger batch-effect combat-seq

Updated Sep 10, 2026
R

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