exon

Extract 3'UTR, 5'UTR, CDS, Promoter, Genes, Introns, Exons from GTF files

A Fast Telegram Group Management Bot Written In Python Using python-telegram-bot.

A python package and a set of shell commands to handle GTF files

PSI-Sigma

R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/

Explore and download data from the recount3 project

[DEPRECATED] MAGERI - Assemble, align and call variants for targeted genome re-sequencing with unique molecular identifiers

Use Thor's Axe to cut exons into their evolutionary building blocks ⚡

Finding putative exons and constructing splicegraphs using Trans-ABySS contigs

GTF/GFF per gene non-overlapping exon length calculator

This is a package that provide tools to extract different genome architecture features, build taxonomy lineage and test features against certain value in taxonomy rank in fully automated pipeline.

A tool to find genes of user specific exon number

Public repo for the recount Bioconductor workflow that is visible at http://bioconductor.org/help/workflows/

Get exons from a transcriptome and raw genomic reads using abyss-bloom and bedtools

Deep neural network for splice sites prediction

Testing of mutual exclussion between pairs of exons of NMD

Package for the recount workshop for BioC2017

A Python-based bioinformatics project that performs DNA sequence analysis including nucleotide mutation conversion, DNA to RNA transcription, mRNA translation into amino acids, AT content calculation, and exon-intron splicing operations.

RNAmotifs is an integrated R, C++, python softwares that evaluates the sequence around differentially regulated alternative exons to identify clusters of short sequences, referred to as multivalent RNA motifs, bound by RNA-binding proteins

Submission for the Bioinformatics Peer Prize 2018